Creamy Butternut Squash Mac and Cheese Recipe

Introduction

This Creamy Butternut Squash Mac and Cheese offers a comforting twist on a classic favorite. The natural sweetness of butternut squash blends beautifully with cheesy richness, creating a luscious, nourishing dish that’s perfect for any occasion.

A close-up top view of a creamy baked pasta dish in a red ceramic casserole dish with scalloped edges, filled with about three layers: the bottom layer is a thick, smooth, rich orange cheese sauce; the middle layer is al dente small shell pasta, slightly coated with sauce and mixed with small bits of green herbs; the top layer is melted golden cheese with small white cheese shreds and light browning spots, sprinkled with fresh tiny green herb leaves for garnish. The dish sits on a white marbled surface with a green cloth near the bottom right and scattered sprigs of fresh thyme. photo taken with an iphone --ar 4:5 --v 7

Ingredients

  • 4 cups (about 560g) peeled and cubed butternut squash (about 1 large or 2 small squash, or 1 lb 4 oz)
  • 1 and 1/4 cups (300ml) vegetable broth or chicken broth (low sodium is fine)
  • 1 and 1/4 cups (300ml) milk*
  • 3 cloves garlic, minced
  • 1 pound (454g) uncooked small/medium pasta shells (or any shape/variety)
  • 1–2 cups (70–140g) roughly chopped kale, stems discarded (optional)
  • 1/3 cup (80g) plain Greek yogurt*
  • 1 teaspoon salt
  • 1/2 teaspoon freshly ground black pepper
  • small pinch ground nutmeg
  • 2 cups (225g) shredded cheese (Gruyère or sharp white cheddar recommended)*
  • optional topping: 1/3 cup (30g) breadcrumbs
  • optional topping: fresh thyme leaves and/or extra freshly ground black pepper

Instructions

  1. Step 1: Combine the squash, broth, milk, and garlic in a medium saucepan over medium-high heat. Bring to a boil, then reduce heat to medium-low and simmer for 20 minutes until the squash is very tender. You can start cooking the pasta during this time.
  2. Step 2: Preheat your oven to 375°F (191°C).
  3. Step 3: Boil water for the pasta according to package directions. Cook the pasta just until al dente. If using kale, add it during the last 1-2 minutes of cooking. If not using kale, cook pasta 1-2 minutes past al dente. Drain and set aside.
  4. Step 4: Pour the warm butternut squash mixture, including all the liquid, into a blender or food processor. Add Greek yogurt, salt, pepper, and nutmeg. Blend until smooth. Transfer to a large bowl and stir in the shredded cheese until combined. It’s fine if the cheese doesn’t fully melt. Taste and adjust seasoning as needed.
  5. Step 5: Add the cooked pasta and kale to the sauce, stirring gently to combine. Pour the mixture into an ungreased 9×13-inch baking dish or similarly sized oven-safe pan. Top with breadcrumbs and an extra sprinkle of cheese, if using.
  6. Step 6: Cover the dish with aluminum foil and bake for 20 minutes. Remove the foil and bake an additional 5 minutes until bubbly around the edges.
  7. Step 7: Remove from the oven and serve topped with extra cheese, fresh thyme leaves, and/or freshly ground black pepper as desired.
  8. Step 8: Store leftovers covered in the refrigerator for up to 5 days.

Tips & Variations

  • Substitute the plain Greek yogurt with sour cream or cream cheese for a different tangy creaminess.
  • Try adding cooked bacon or caramelized onions for extra flavor depth.
  • For a vegan version, use dairy-free cheese and substitute yogurt with a plant-based alternative.
  • To make it gluten-free, use gluten-free pasta and skip the breadcrumb topping or use gluten-free breadcrumbs.
  • Adding a pinch of smoked paprika or cayenne pepper can give the dish a subtle smoky or spicy kick.

Storage

Store leftovers in an airtight container in the refrigerator for up to 5 days. Reheat gently in the oven or microwave until warmed through. If reheating in the oven, cover the dish with foil to prevent drying out.

How to Serve

The image shows a close-up of creamy macaroni and cheese with shell pasta. The dish has three main visual layers: the top layer is light golden-brown melted cheese with tiny black pepper specks and grated cheese bits, the middle layer is rich yellow-orange cheese sauce coating tender pasta shells evenly, and the bottom layer has some green spinach pieces mixed in, adding texture and color. A silver spoon is scooping up a portion of the pasta, showing the thick cheese sauce glistening under light, with the dish held in a white bowl. The background is a white marbled texture. photo taken with an iphone --ar 4:5 --v 7

Serve this delicious recipe with your favorite sides.

FAQs

Can I use frozen butternut squash for this recipe?

Yes, frozen butternut squash works well. Just thaw it before cooking to ensure even simmering and blending.

Can I prepare this dish ahead of time?

You can assemble the mac and cheese up to the baking step and store it covered in the refrigerator for up to 24 hours before baking. Bake just before serving for the best texture and flavor.

Print

Creamy Butternut Squash Mac and Cheese Recipe

This Creamy Butternut Squash Mac and Cheese recipe offers a healthy twist on the classic favorite by using butternut squash and Greek yogurt to create a velvety cheese sauce. It’s a comforting baked pasta dish that combines tender pasta shells, optional kale for added greens, and a rich blend of shredded cheese, topped with crispy breadcrumbs and fresh thyme for an extra burst of flavor.

  • Author: Maya
  • Prep Time: 15 minutes
  • Cook Time: 45 minutes
  • Total Time: 1 hour
  • Yield: 6 servings 1x
  • Category: Main Dish
  • Method: Baking
  • Cuisine: American
  • Diet: Vegetarian

Ingredients

Scale

Squash Sauce

  • 4 cups (about 560g) peeled and cubed butternut squash (about 1 large or 2 small squash, or 1 lb 4 oz)
  • 1 and 1/4 cups (300ml) vegetable broth or chicken broth (low sodium)
  • 1 and 1/4 cups (300ml) milk
  • 3 cloves garlic, minced
  • 1/3 cup (80g) plain Greek yogurt
  • 1 teaspoon salt
  • 1/2 teaspoon freshly ground black pepper
  • Small pinch ground nutmeg

Pasta and Toppings

  • 1 pound (454g) uncooked small/medium pasta shells (or any shape/variety)
  • 12 cups (70–140g) roughly chopped kale, stems discarded (optional)
  • 2 cups (225g) shredded cheese (Gruyère or sharp white cheddar preferred)
  • Optional topping: 1/3 cup (30g) breadcrumbs
  • Optional topping: fresh thyme leaves and/or extra freshly ground black pepper

Instructions

  1. Simmer the Squash: Combine the peeled and cubed butternut squash, broth, milk, and minced garlic in a medium saucepan over medium-high heat. Bring it to a boil, then reduce heat to medium-low and simmer for 20 minutes until the squash is very tender, checking softness by piercing with a fork. Set aside once done.
  2. Preheat Oven: While the squash simmers, preheat your oven to 375°F (191°C).
  3. Cook Pasta and Kale: Boil enough water per package directions and cook the pasta until just al dente. If using kale, add it during the last 1–2 minutes of boiling. If not using kale, cook pasta 1–2 minutes beyond al dente for extra tenderness. Drain pasta and kale and set aside.
  4. Blend the Sauce: Transfer the warm butternut squash mixture with all liquid into a blender or food processor. Add Greek yogurt, salt, pepper, and nutmeg. Blend until smooth. Pour the sauce into a large bowl and stir in the shredded cheese until combined. Cheese may not fully melt—this is expected. Taste and adjust seasoning as needed.
  5. Combine Pasta and Sauce: Add the drained pasta and kale to the cheese sauce and stir well. Although the sauce appears liquidy, the pasta will absorb it.
  6. Prepare for Baking: Pour the combined mixture into an ungreased 9×13-inch baking pan, a 12-inch oven-safe skillet, or any 3–4 quart baking dish. Sprinkle optional breadcrumbs and additional cheese on top if desired.
  7. Bake Covered and Uncovered: Cover the dish loosely with aluminum foil and bake for 20 minutes. Remove the foil and bake an additional 5 minutes until the edges are bubbly and the topping is lightly browned.
  8. Serve and Garnish: Remove from oven and serve immediately. Garnish with extra cheese, fresh thyme leaves, and freshly ground black pepper as desired.
  9. Store Leftovers: Cover and refrigerate any leftovers for up to 5 days.

Notes

  • Using low sodium broth helps control salt levels.
  • Kale is optional but adds a nutritious green element.
  • Any pasta shape can be used; shells hold sauce well.
  • Gruyère or sharp white cheddar cheeses give the best flavor.
  • Breadcrumb topping adds a pleasant crunch but can be omitted for gluten-free.
  • Adjust seasoning after blending the sauce to taste.
  • Leftovers keep well refrigerated up to 5 days.

Keywords: butternut squash mac and cheese, healthy mac and cheese, baked mac and cheese, vegetarian pasta recipes, comfort food

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